Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CAPN5	HGNC:1482 (HGNC) 726 (Entrez Gene) 602537 (OMIM) CAPN5 (Alliance of Genome Resources)	Chr11 q13.5	Chr11:77066961-77126155 (+) GRCh38	neovascular inflammatory vitreoretinopathy	O15484 (UniProt | EBI) NM_001425321 (RefSeq)
mouse	Capn5	MGI:1100859 (MGI) 12337 (Entrez Gene) Gene Tree Capn5 (Alliance of Genome Resources)	Chr7 53.57 cM	Chr7:97770766-97827481 (-) GRCm39		ENSMUSG00000035547 (Ensembl Gene Model) ENSMUSP00000102729 (Ensembl) ENSMUST00000107112 (Ensembl)
rat	Capn5	RGD:620084 (Rat Genome Database) 171495 (Entrez Gene) Capn5 (Alliance of Genome Resources)	Chr1 q32			Q8R4C0 (UniProt | EBI) NM_134461 (RefSeq)
zebrafish	capn5a	ZDB-GENE-061103-214 (Zebrafish Model Organism Database) 563346 (Entrez Gene) capn5a (Alliance of Genome Resources)	Chr18			NP_001073476 (RefSeq) NM_001080007 (RefSeq)
	capn5b	ZDB-GENE-091116-29 (Zebrafish Model Organism Database) 100006332 (Entrez Gene) capn5b (Alliance of Genome Resources)	Chr21			XP_001345114 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.