Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	VARS1	HGNC:12651 (HGNC) 7407 (Entrez Gene) 192150 (OMIM) VARS1 (Alliance of Genome Resources)	Chr6 p21.33	Chr6:31777518-31795752 (-) GRCh38		P26640 (UniProt | EBI) NM_006295 (RefSeq)
mouse	Vars1	MGI:90675 (MGI) 22321 (Entrez Gene) Gene Tree Vars1 (Alliance of Genome Resources)	Chr17 18.54 cM	Chr17:35219963-35235298 (+) GRCm39		ENSMUSG00000007029 (Ensembl Gene Model) ENSMUSP00000133994 (Ensembl) ENSMUST00000173584 (Ensembl)
rat	Vars1	RGD:3950 (Rat Genome Database) 25009 (Entrez Gene) Vars1 (Alliance of Genome Resources)	Chr20 p12			Q04462 (UniProt | EBI) NM_053292 (RefSeq)
zebrafish	vars1	ZDB-GENE-010601-1 (Zebrafish Model Organism Database) 114427 (Entrez Gene) vars1 (Alliance of Genome Resources)	Chr16			NP_001298275 (RefSeq) NM_001311346 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.