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Vertebrate Homology
Source
Alliance of Genome Resources

 
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human OR5K4 HGNC:31291 (HGNC)
403278 (Entrez Gene)
OR5K4 (Alliance of Genome Resources)
Chr3 q11.2 Chr3:98353854-98354819 (+)
GRCh38
A6NMS3 (UniProt | EBI)
NM_001005517 (RefSeq)
mouse Or5k17 MGI:3030015 (MGI)
259001 (Entrez Gene)
Gene Tree
Or5k17 (Alliance of Genome Resources)
Chr16 34.83 cM Chr16:58745920-58749007 (-)
GRCm39
259001 (NCBI Gene Model)
Q8VGQ7 (UniProt | EBI)
NM_146999 (RefSeq)
rat Or5k17 RGD:1333626 (Rat Genome Database)
404978 (Entrez Gene)
Or5k17 (Alliance of Genome Resources)
Chr11 q12 NP_001000725 (RefSeq)
NM_001000725 (RefSeq)
zebrafish or42a1 ZDB-GENE-070806-67 (Zebrafish Model Organism Database)
100151522 (Entrez Gene)
or42a1 (Alliance of Genome Resources)
Chr10 NP_001122058 (RefSeq)
NM_001128586 (RefSeq)
or42a2 ZDB-GENE-070804-6 (Zebrafish Model Organism Database)
100149914 (Entrez Gene)
or42a2 (Alliance of Genome Resources)
Chr10 NP_001124279 (RefSeq)
NM_001130807 (RefSeq)
or42a5 ZDB-GENE-070806-69 (Zebrafish Model Organism Database)
100148447 (Entrez Gene)
or42a5 (Alliance of Genome Resources)
Chr10 NP_001122035 (RefSeq)
NM_001128563 (RefSeq)
or42a6 ZDB-GENE-070804-5 (Zebrafish Model Organism Database)
100149214 (Entrez Gene)
or42a6 (Alliance of Genome Resources)
Chr10 NP_001122043 (RefSeq)
NM_001128571 (RefSeq)
or42a7 ZDB-GENE-070806-70 (Zebrafish Model Organism Database)
100151312 (Entrez Gene)
or42a7 (Alliance of Genome Resources)
Chr10 NP_001124288 (RefSeq)
NM_001130816 (RefSeq)
or42a8 ZDB-GENE-070806-68 (Zebrafish Model Organism Database)
100147989 (Entrez Gene)
or42a8 (Alliance of Genome Resources)
Chr10 NP_001124270 (RefSeq)
NM_001130798 (RefSeq)
or42b1 ZDB-GENE-070806-76 (Zebrafish Model Organism Database)
100150812 (Entrez Gene)
or42b1 (Alliance of Genome Resources)
Chr10 NP_001121883 (RefSeq)
NM_001128411 (RefSeq)
or42c1 ZDB-GENE-000329-14 (Zebrafish Model Organism Database)
58115 (Entrez Gene)
or42c1 (Alliance of Genome Resources)
Chr15 NP_571667 (RefSeq)
NM_131592 (RefSeq)
or42c2 ZDB-GENE-000329-10 (Zebrafish Model Organism Database)
58103 (Entrez Gene)
or42c2 (Alliance of Genome Resources)
Chr15 NP_571656 (RefSeq)
NM_001362428 (RefSeq)
or42c4 ZDB-GENE-000329-15 (Zebrafish Model Organism Database)
58104 (Entrez Gene)
or42c4 (Alliance of Genome Resources)
Chr15 NP_571657 (RefSeq)
NM_131582 (RefSeq)
or42c5 ZDB-GENE-010308-10 (Zebrafish Model Organism Database)
80362 (Entrez Gene)
or42c5 (Alliance of Genome Resources)
Chr15 NP_571819 (RefSeq)
NM_131744 (RefSeq)
or42e2 ZDB-GENE-010308-12 (Zebrafish Model Organism Database)
80372 (Entrez Gene)
or42e2 (Alliance of Genome Resources)
Chr15 NP_694517 (RefSeq)
NM_152985 (RefSeq)
or42e3 ZDB-GENE-010308-19 (Zebrafish Model Organism Database)
791954 (Entrez Gene)
or42e3 (Alliance of Genome Resources)
Chr15 NP_001122244 (RefSeq)
NM_001128772 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
06/12/2024
MGI 6.13
The Jackson Laboratory