Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	LIMCH1	HGNC:29191 (HGNC) 22998 (Entrez Gene) 617750 (OMIM) LIMCH1 (Alliance of Genome Resources)	Chr4 p13	Chr4:41359607-41700044 (+) GRCh38		Q9UPQ0 (UniProt | EBI) NM_001112719 (RefSeq)
mouse	Limch1	MGI:1924819 (MGI) 77569 (Entrez Gene) Gene Tree Limch1 (Alliance of Genome Resources)	Chr5 35.95 cM	Chr5:66903232-67214502 (+) GRCm39		77569 (NCBI Gene Model) Q3UH68 (UniProt | EBI) NM_001401420 (RefSeq)
rat	Limch1	RGD:1305269 (Rat Genome Database) 305332 (Entrez Gene) Limch1 (Alliance of Genome Resources)	Chr14 p11			NP_001388509 (RefSeq) NM_001401579 (RefSeq)
zebrafish	limch1a	ZDB-GENE-090312-153 (Zebrafish Model Organism Database) 561940 (Entrez Gene) limch1a (Alliance of Genome Resources)	Chr1			NP_001417781 (RefSeq) NM_001145577 (RefSeq)
	limch1b	ZDB-GENE-030131-9210 (Zebrafish Model Organism Database) 557200 (Entrez Gene) limch1b (Alliance of Genome Resources)	Chr14			XP_009289282 (RefSeq) NM_001114729 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.