Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SLMAP	HGNC:16643 (HGNC) 7871 (Entrez Gene) 602701 (OMIM) SLMAP (Alliance of Genome Resources)	Chr3 p14.3	Chr3:57755450-57930013 (+) GRCh38		Q14BN4 (UniProt | EBI) NM_001377923 (RefSeq)
mouse	Slmap	MGI:1933549 (MGI) 83997 (Entrez Gene) Gene Tree Slmap (Alliance of Genome Resources)	Chr14 16.09 cM	Chr14:26134323-26256086 (-) GRCm39		ENSMUSG00000021870 (Ensembl Gene Model) ENSMUSP00000117816 (Ensembl) ENSMUST00000139075 (Ensembl)
rat	Slmap	RGD:1307674 (Rat Genome Database) 290533 (Entrez Gene) Slmap (Alliance of Genome Resources)	Chr16 p16			P0C219 (UniProt | EBI) NM_001106060 (RefSeq)
zebrafish	slmapa	ZDB-GENE-061013-184 (Zebrafish Model Organism Database) 572011 (Entrez Gene) slmapa (Alliance of Genome Resources)	Chr11			NP_001070722 (RefSeq) NM_001077254 (RefSeq)
	slmapb	ZDB-GENE-040426-809 (Zebrafish Model Organism Database) 393146 (Entrez Gene) slmapb (Alliance of Genome Resources)	Chr23			NP_956471 (RefSeq) NM_200177 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.