Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	HPS1	HGNC:5163 (HGNC) 3257 (Entrez Gene) 604982 (OMIM) HPS1 (Alliance of Genome Resources)	Chr10 q24.2	Chr10:98410939-98446963 (-) GRCh38	Hermansky-Pudlak syndrome 1 oculocutaneous albinism	Q92902 (UniProt | EBI) NM_000195 (RefSeq)
mouse	Hps1	MGI:2177763 (MGI) 192236 (Entrez Gene) Gene Tree Hps1 (Alliance of Genome Resources)	Chr19 36.56 cM	Chr19:42743544-42768417 (-) GRCm39	Hermansky-Pudlak syndrome 1 platelet storage pool deficiency	ENSMUSG00000025188 (Ensembl Gene Model) ENSMUSP00000125662 (Ensembl) ENSMUST00000160455 (Ensembl)
rat	Hps1	RGD:69193 (Rat Genome Database) 114638 (Entrez Gene) Hps1 (Alliance of Genome Resources)	Chr1 q54			NP_414541 (RefSeq) NM_040669 (RefSeq)
zebrafish	hps1	ZDB-GENE-051113-152 (Zebrafish Model Organism Database) 563067 (Entrez Gene) hps1 (Alliance of Genome Resources)	Chr13			NP_001032777 (RefSeq) NM_001037688 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.