Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SSC5D	HGNC:26641 (HGNC) 284297 (Entrez Gene) 618194 (OMIM) SSC5D (Alliance of Genome Resources)	Chr19 q13.42	Chr19:55488404-55519099 (+) GRCh38		A1L4H1 (UniProt | EBI) NM_001195267 (RefSeq)
mouse	Ssc5d	MGI:3606211 (MGI) 269855 (Entrez Gene) Gene Tree Ssc5d (Alliance of Genome Resources)	Chr7 2.85 cM	Chr7:4928820-4947827 (+) GRCm39		269855 (NCBI Gene Model) Q8BV57 (UniProt | EBI) NM_173008 (RefSeq)
rat	Ssc5d	RGD:1565772 (Rat Genome Database) 308341 (Entrez Gene) Ssc5d (Alliance of Genome Resources)	Chr1 q12			NP_001128017 (RefSeq) NM_001134545 (RefSeq)
zebrafish	si:ch211-150o23.3	ZDB-GENE-060503-479 (Zebrafish Model Organism Database) 799202 (Entrez Gene) si:ch211-150o23.3 (Alliance of Genome Resources)	Chr8			XP_021334071 (RefSeq)
	si:ch211-161n3.3	ZDB-GENE-041210-102 (Zebrafish Model Organism Database) 564881 (Entrez Gene) si:ch211-161n3.3 (Alliance of Genome Resources)	Chr4			XP_021327212 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.