Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	HMX1	HGNC:5017 (HGNC) 3166 (Entrez Gene) 142992 (OMIM) HMX1 (Alliance of Genome Resources)	Chr4 p16.1	Chr4:8846076-8871839 (-) GRCh38	oculoauricular syndrome	Q9NP08 (UniProt | EBI) NM_018942 (RefSeq)
mouse	Hmx1	MGI:107178 (MGI) 15371 (Entrez Gene) Gene Tree Hmx1 (Alliance of Genome Resources)	Chr5 18.14 cM	Chr5:35546452-35557074 (+) GRCm39	oculoauricular syndrome	ENSMUSG00000067438 (Ensembl Gene Model) ENSMUSP00000084958 (Ensembl) ENSMUST00000087674 (Ensembl)
rat	Hmx1	RGD:1304928 (Rat Genome Database) 360960 (Entrez Gene) Hmx1 (Alliance of Genome Resources)	Chr14 q21			NP_001101833 (RefSeq) NM_001108363 (RefSeq)
zebrafish	hmx1	ZDB-GENE-080204-54 (Zebrafish Model Organism Database) 797503 (Entrez Gene) hmx1 (Alliance of Genome Resources)	Chr1			NP_001106998 (RefSeq) NM_001113526 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.