Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CALN1	HGNC:13248 (HGNC) 83698 (Entrez Gene) 607176 (OMIM) CALN1 (Alliance of Genome Resources)	Chr7 q11.22	Chr7:71779491-72504279 (-) GRCh38		Q9BXU9 (UniProt | EBI) NM_001017440 (RefSeq)
mouse	Caln1	MGI:2155987 (MGI) 140904 (Entrez Gene) Gene Tree Caln1 (Alliance of Genome Resources)	Chr5 69.29 cM	Chr5:130398296-130876253 (+) GRCm39		ENSMUSG00000060371 (Ensembl Gene Model) ENSMUSP00000083193 (Ensembl) ENSMUST00000086029 (Ensembl)
rat	Caln1	RGD:1305843 (Rat Genome Database) 363909 (Entrez Gene) Caln1 (Alliance of Genome Resources)	Chr12 q12			Q06BI3 (UniProt | EBI) NM_001077201 (RefSeq)
zebrafish	caln1	ZDB-GENE-130313-1 (Zebrafish Model Organism Database) 562420 (Entrez Gene) caln1 (Alliance of Genome Resources)	Chr15			XP_021322021 (RefSeq)
	caln2	ZDB-GENE-091204-251 (Zebrafish Model Organism Database) 100007635 (Entrez Gene) caln2 (Alliance of Genome Resources)	Chr21			XP_001343041 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.