Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PCDH11X	HGNC:8656 (HGNC) 27328 (Entrez Gene) 300246 (OMIM) PCDH11X (Alliance of Genome Resources)	ChrX q21.31	ChrX:91779261-92623230 (+) GRCh38		Q9BZA7 (UniProt | EBI) NM_001168362 (RefSeq)
	PCDH11Y	HGNC:15813 (HGNC) 83259 (Entrez Gene) 400022 (OMIM) PCDH11Y (Alliance of Genome Resources)	ChrY p11.2	ChrY:5000226-5742228 (+) GRCh38		Q9BZA8 (UniProt | EBI) NM_001278619 (RefSeq)
mouse	Pcdh11x	MGI:2442849 (MGI) 245578 (Entrez Gene) Gene Tree Pcdh11x (Alliance of Genome Resources)	ChrX 49.58 cM	ChrX:119199956-119820316 (+) GRCm39		ENSMUSG00000034755 (Ensembl Gene Model) ENSMUSP00000108991 (Ensembl) ENSMUST00000113364 (Ensembl)
zebrafish	pcdh11	ZDB-GENE-140106-21 (Zebrafish Model Organism Database) 100333121 (Entrez Gene) pcdh11 (Alliance of Genome Resources)	Chr14			XP_005173248 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.