Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PAMR1	HGNC:24554 (HGNC) 25891 (Entrez Gene) PAMR1 (Alliance of Genome Resources)	Chr11 p13	Chr11:35431823-35530300 (-) GRCh38		Q6UXH9 (UniProt | EBI) NM_001282675 (RefSeq)
mouse	Pamr1	MGI:2445082 (MGI) 210622 (Entrez Gene) Gene Tree Pamr1 (Alliance of Genome Resources)	Chr2 54.13 cM	Chr2:102380357-102473386 (+) GRCm39		ENSMUSG00000027188 (Ensembl Gene Model) ENSMUSP00000028612 (Ensembl) ENSMUST00000028612 (Ensembl)
rat	Pamr1	RGD:1308745 (Rat Genome Database) 311252 (Entrez Gene) Pamr1 (Alliance of Genome Resources)	Chr3 q32			NP_001101225 (RefSeq) NM_001107755 (RefSeq)
zebrafish	pamr1a	ZDB-GENE-161017-116 (Zebrafish Model Organism Database) 560295 (Entrez Gene) pamr1a (Alliance of Genome Resources)	Chr7			XP_017212577 (RefSeq)
	pamr1b	ZDB-GENE-100422-12 (Zebrafish Model Organism Database) 100330319 (Entrez Gene) pamr1b (Alliance of Genome Resources)	Chr25			XP_009296508 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.