Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	DEPP1	HGNC:23355 (HGNC) 11067 (Entrez Gene) 611309 (OMIM) DEPP1 (Alliance of Genome Resources)	Chr10 q11.21	Chr10:44970981-44978809 (-) GRCh38		Q9NTK1 (UniProt | EBI) NM_007021 (RefSeq)
mouse	Depp1	MGI:1918730 (MGI) 213393 (Entrez Gene) Gene Tree Depp1 (Alliance of Genome Resources)	Chr6 53.83 cM	Chr6:116627645-116629808 (+) GRCm39		213393 (NCBI Gene Model) Q8K2F3 (UniProt | EBI) NM_145980 (RefSeq)
rat	Depp1	RGD:1565700 (Rat Genome Database) 500300 (Entrez Gene) Depp1 (Alliance of Genome Resources)	Chr4 q42			Q5BMD4 (UniProt | EBI) NM_001024334 (RefSeq)
zebrafish	si:ch73-6k14.2	ZDB-GENE-110914-243 (Zebrafish Model Organism Database) 100150046 (Entrez Gene) si:ch73-6k14.2 (Alliance of Genome Resources)	Chr1			XP_021332890 (RefSeq)
	si:dkeyp-72g9.4	ZDB-GENE-031204-23 (Zebrafish Model Organism Database) 793842 (Entrez Gene) si:dkeyp-72g9.4 (Alliance of Genome Resources)	Chr21			XP_017208442 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.