Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CAPN11	HGNC:1478 (HGNC) 11131 (Entrez Gene) 604822 (OMIM) CAPN11 (Alliance of Genome Resources)	Chr6 p21.1	Chr6:44158811-44184401 (+) GRCh38		Q9UMQ6 (UniProt | EBI) NM_007058 (RefSeq)
mouse	Capn11	MGI:1352490 (MGI) 268958 (Entrez Gene) Gene Tree Capn11 (Alliance of Genome Resources)	Chr17 22.59 cM	Chr17:45941130-45970251 (-) GRCm39		ENSMUSG00000058626 (Ensembl Gene Model) ENSMUSP00000113132 (Ensembl) ENSMUST00000120717 (Ensembl)
rat	Capn11	RGD:1302946 (Rat Genome Database) 408218 (Entrez Gene) Capn11 (Alliance of Genome Resources)	Chr9 q12			Q4V8Q1 (UniProt | EBI) NM_001002806 (RefSeq)
zebrafish	capn1a	ZDB-GENE-040426-1263 (Zebrafish Model Organism Database) 393417 (Entrez Gene) capn1a (Alliance of Genome Resources)	Chr13			NP_956739 (RefSeq) NM_200445 (RefSeq)
	capn1b	ZDB-GENE-060503-491 (Zebrafish Model Organism Database) 565106 (Entrez Gene) capn1b (Alliance of Genome Resources)	Chr22			NP_001138267 (RefSeq) NM_001144795 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.