Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	ASIC1	HGNC:100 (HGNC) 41 (Entrez Gene) 602866 (OMIM) ASIC1 (Alliance of Genome Resources)	Chr12 q13.12	Chr12:50057548-50083622 (+) GRCh38		P78348 (UniProt | EBI) NM_001256830 (RefSeq)
mouse	Asic1	MGI:1194915 (MGI) 11419 (Entrez Gene) Gene Tree Asic1 (Alliance of Genome Resources)	Chr15 56.13 cM	Chr15:99568249-99599011 (+) GRCm39		ENSMUSG00000023017 (Ensembl Gene Model) ENSMUSP00000154379 (Ensembl) ENSMUST00000228185 (Ensembl)
rat	Asic1	RGD:71062 (Rat Genome Database) 79123 (Entrez Gene) Asic1 (Alliance of Genome Resources)	Chr7			P55926 (UniProt | EBI) NM_024154 (RefSeq)
zebrafish	asic1a	ZDB-GENE-040513-2 (Zebrafish Model Organism Database) 791696 (Entrez Gene) asic1a (Alliance of Genome Resources)	Chr8			Q708S7 (UniProt | EBI) NM_214790 (RefSeq)
	asic1b	ZDB-GENE-040513-1 (Zebrafish Model Organism Database) 407672 (Entrez Gene) asic1b (Alliance of Genome Resources)	Chr22			Q708S8 (UniProt | EBI) NM_214791 (RefSeq)
	asic1c	ZDB-GENE-040513-3 (Zebrafish Model Organism Database) 407670 (Entrez Gene) asic1c (Alliance of Genome Resources)	Chr24			Q708S6 (UniProt | EBI) NM_214789 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.