Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	LIMS1	HGNC:6616 (HGNC) 3987 (Entrez Gene) 602567 (OMIM) LIMS1 (Alliance of Genome Resources)	Chr2 q12.3	Chr2:108533671-108687246 (+) GRCh38		P48059 (UniProt | EBI) NM_001394897 (RefSeq)
mouse	Lims1	MGI:1195263 (MGI) 110829 (Entrez Gene) Gene Tree Lims1 (Alliance of Genome Resources)	Chr10 29.31 cM	Chr10:58159288-58260513 (+) GRCm39		ENSMUSG00000019920 (Ensembl Gene Model) ENSMUSP00000020077 (Ensembl) ENSMUST00000020077 (Ensembl)
rat	Lims1	RGD:1560732 (Rat Genome Database) 499443 (Entrez Gene) Lims1 (Alliance of Genome Resources)	Chr20 q11			NP_001402084 (RefSeq) NM_001415155 (RefSeq)
zebrafish	lims1	ZDB-GENE-050522-236 (Zebrafish Model Organism Database) 554019 (Entrez Gene) lims1 (Alliance of Genome Resources)	Chr11			NP_001019560 (RefSeq) NM_001024389 (RefSeq)
	lims2	ZDB-GENE-050522-56 (Zebrafish Model Organism Database) 553696 (Entrez Gene) lims2 (Alliance of Genome Resources)	Chr9			NP_001018506 (RefSeq) NM_001020670 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.