Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	RPH3A	HGNC:17056 (HGNC) 22895 (Entrez Gene) 612159 (OMIM) RPH3A (Alliance of Genome Resources)	Chr12 q24.13	Chr12:112570380-112898881 (+) GRCh38		Q9Y2J0 (UniProt | EBI) NM_001143854 (RefSeq)
mouse	Rph3a	MGI:102788 (MGI) 19894 (Entrez Gene) Gene Tree Rph3a (Alliance of Genome Resources)	Chr5 61.17 cM	Chr5:121078562-121148155 (-) GRCm39		ENSMUSG00000029608 (Ensembl Gene Model) ENSMUSP00000078198 (Ensembl) ENSMUST00000079204 (Ensembl)
rat	Rph3a	RGD:620073 (Rat Genome Database) 171039 (Entrez Gene) Rph3a (Alliance of Genome Resources)	Chr12 q16			P47709 (UniProt | EBI) NM_133518 (RefSeq)
zebrafish	rph3aa	ZDB-GENE-090706-2 (Zebrafish Model Organism Database) 101886567 (Entrez Gene) rph3aa (Alliance of Genome Resources)	Chr10			XP_005172660 (RefSeq)
	rph3ab	ZDB-GENE-090706-3 (Zebrafish Model Organism Database) 563377 (Entrez Gene) rph3ab (Alliance of Genome Resources)	Chr7			XP_691832 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.