Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	VOPP1	HGNC:34518 (HGNC) 81552 (Entrez Gene) 611915 (OMIM) VOPP1 (Alliance of Genome Resources)	Chr7 p11.2	Chr7:55434964-55572988 (-) GRCh38		Q96AW1 (UniProt | EBI) NM_001321246 (RefSeq)
mouse	Vopp1	MGI:2141658 (MGI) 232023 (Entrez Gene) Gene Tree Vopp1 (Alliance of Genome Resources)	Chr6 27.82 cM	Chr6:57729249-57802110 (-) GRCm39		232023 (NCBI Gene Model) Q8R1C3 (UniProt | EBI) NR_177289 (RefSeq)
rat	Vopp1	RGD:1306494 (Rat Genome Database) 362374 (Entrez Gene) Vopp1 (Alliance of Genome Resources)	Chr4 q24			B5DEK8 (UniProt | EBI) NM_001108630 (RefSeq)
zebrafish	vopp1a	ZDB-GENE-070912-476 (Zebrafish Model Organism Database) 100007510 (Entrez Gene) vopp1a (Alliance of Genome Resources)	Chr2			NP_001108544 (RefSeq) NM_001115072 (RefSeq)
	vopp1b	ZDB-GENE-091204-64 (Zebrafish Model Organism Database) 101885019 (Entrez Gene) vopp1b (Alliance of Genome Resources)	Chr24			XP_005170670 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.