Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CSMD2	HGNC:19290 (HGNC) 114784 (Entrez Gene) 608398 (OMIM) CSMD2 (Alliance of Genome Resources)	Chr1 p35.1	Chr1:33513998-34165842 (-) GRCh38		Q7Z408 (UniProt | EBI) NM_001281956 (RefSeq)
mouse	Csmd2	MGI:2386401 (MGI) 329942 (Entrez Gene) Gene Tree Csmd2 (Alliance of Genome Resources)	Chr4 61.65 cM	Chr4:127881650-128461449 (+) GRCm39		ENSMUSG00000028804 (Ensembl Gene Model) ENSMUSP00000138958 (Ensembl) ENSMUST00000184063 (Ensembl)
rat	Csmd2	RGD:1565728 (Rat Genome Database) 313040 (Entrez Gene) Csmd2 (Alliance of Genome Resources)	Chr5 q36			XP_063144694 (RefSeq)
zebrafish	csmd2	ZDB-GENE-030616-39 (Zebrafish Model Organism Database) 565460 (Entrez Gene) csmd2 (Alliance of Genome Resources)	Chr19			XP_693833 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.