CLDN9 Vertebrate HGNC

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Vertebrate Homology

Source

Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
- human
- mouse
- rat
- zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 08/21/2024 MGI 6.24

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences select all deselect all Go
human	CLDN9	HGNC:2051 (HGNC) 9080 (Entrez Gene) 615799 (OMIM) CLDN9 (Alliance of Genome Resources)	Chr16 p13.3	Chr16:3012923-3014505 (+) GRCh38	autosomal recessive nonsyndromic deafness 116	O95484 (UniProt \| EBI) NM_020982 (RefSeq)
mouse	Cldn9	MGI:1913100 (MGI) 56863 (Entrez Gene) Gene Tree Cldn9 (Alliance of Genome Resources)	Chr17 11.99 cM	Chr17:23901558-23903000 (-) GRCm39		56863 (NCBI Gene Model) Q9Z0S7 (UniProt \| EBI) NM_020293 (RefSeq)
rat	Cldn9	RGD:1308999 (Rat Genome Database) 287099 (Entrez Gene) Cldn9 (Alliance of Genome Resources)	Chr10 q12			NP_001011889 (RefSeq) NM_001011889 (RefSeq)
zebrafish	cldn3c	ZDB-GENE-010328-8 (Zebrafish Model Organism Database) 81587 (Entrez Gene) cldn3c (Alliance of Genome Resources)	Chr21			NP_571842 (RefSeq) NM_131767 (RefSeq)
	cldn3d	ZDB-GENE-010328-3 (Zebrafish Model Organism Database) 81582 (Entrez Gene) cldn3d (Alliance of Genome Resources)	Chr21			NP_571839 (RefSeq) NM_131764 (RefSeq)
	cldn29	ZDB-GENE-050417-293 (Zebrafish Model Organism Database) 550468 (Entrez Gene) cldn29 (Alliance of Genome Resources)	Chr21			NP_001017771 (RefSeq) NM_001017771 (RefSeq)
	cldnd	ZDB-GENE-010328-4 (Zebrafish Model Organism Database) 81583 (Entrez Gene) cldnd (Alliance of Genome Resources)	Chr21			Q9YH91 (UniProt \| EBI) NM_180964 (RefSeq)
	cldng	ZDB-GENE-010328-7 (Zebrafish Model Organism Database) 81586 (Entrez Gene) cldng (Alliance of Genome Resources)	Chr1			NP_851296 (RefSeq) NM_180965 (RefSeq)
	cldnj	ZDB-GENE-010328-10 (Zebrafish Model Organism Database) 81589 (Entrez Gene) cldnj (Alliance of Genome Resources)	Chr15			NP_571844 (RefSeq) NM_131769 (RefSeq)
	cldnk	ZDB-GENE-040801-201 (Zebrafish Model Organism Database) 445070 (Entrez Gene) cldnk (Alliance of Genome Resources)	Chr3			NP_001003464 (RefSeq) NM_001003464 (RefSeq)