Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PBXIP1	HGNC:21199 (HGNC) 57326 (Entrez Gene) 618819 (OMIM) PBXIP1 (Alliance of Genome Resources)	Chr1 q21.3	Chr1:154944076-154956123 (-) GRCh38		Q96AQ6 (UniProt | EBI) NM_020524 (RefSeq)
mouse	Pbxip1	MGI:2441670 (MGI) 229534 (Entrez Gene) Gene Tree Pbxip1 (Alliance of Genome Resources)	Chr3 39.12 cM	Chr3:89344013-89358259 (+) GRCm39		ENSMUSG00000042613 (Ensembl Gene Model) ENSMUSP00000040429 (Ensembl) ENSMUST00000038942 (Ensembl)
rat	Pbxip1	RGD:1305180 (Rat Genome Database) 310644 (Entrez Gene) Pbxip1 (Alliance of Genome Resources)	Chr2 q34			A2VD12 (UniProt | EBI) NM_001100976 (RefSeq)
zebrafish	pbxip1a	ZDB-GENE-060503-871 (Zebrafish Model Organism Database) 563463 (Entrez Gene) pbxip1a (Alliance of Genome Resources)	Chr19			XP_691915 (RefSeq)
	pbxip1b	ZDB-GENE-070112-2032 (Zebrafish Model Organism Database) 553293 (Entrez Gene) pbxip1b (Alliance of Genome Resources)	Chr16			NP_001073425 (RefSeq) NM_001079956 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.