Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CD209	HGNC:1641 (HGNC) 30835 (Entrez Gene) 604672 (OMIM) CD209 (Alliance of Genome Resources)	Chr19 p13.2	Chr19:7739993-7747564 (-) GRCh38	acquired immunodeficiency syndrome aspergillosis Coronavirus infectious disease dengue disease dengue hemorrhagic fever extrapulmonary tuberculosis human immunodeficiency virus infectious disease pulmonary tuberculosis tuberculosis	Q9NNX6 (UniProt | EBI) NM_021155 (RefSeq)
	CLEC4M	HGNC:13523 (HGNC) 10332 (Entrez Gene) 605872 (OMIM) CLEC4M (Alliance of Genome Resources)	Chr19 p13.2	Chr19:7763210-7769605 (+) GRCh38	extrapulmonary tuberculosis pulmonary tuberculosis severe acute respiratory syndrome	Q9H2X3 (UniProt | EBI) NM_001416369 (RefSeq)
mouse	Cd209a	MGI:2157942 (MGI) 170786 (Entrez Gene) Gene Tree Cd209a (Alliance of Genome Resources)	Chr8 1.92 cM	Chr8:3793397-3798984 (-) GRCm39		ENSMUSG00000031494 (Ensembl Gene Model) ENSMUSP00000012847 (Ensembl) ENSMUST00000012847 (Ensembl)
rat	Cd209a	RGD:1308239 (Rat Genome Database) 288375 (Entrez Gene) Cd209a (Alliance of Genome Resources)	Chr12 p12			NP_001099374 (RefSeq) NM_001105904 (RefSeq)
zebrafish	cd209	ZDB-GENE-061207-22 (Zebrafish Model Organism Database) 100334918 (Entrez Gene) cd209 (Alliance of Genome Resources)	Chr10			NP_001186302 (RefSeq) NM_001199373 (RefSeq)
	zgc:174904	ZDB-GENE-080204-76 (Zebrafish Model Organism Database) 564690 (Entrez Gene) zgc:174904 (Alliance of Genome Resources)	Chr19			NP_001170922 (RefSeq) NM_001177451 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.