Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CPNE1	HGNC:2314 (HGNC) 8904 (Entrez Gene) 604205 (OMIM) CPNE1 (Alliance of Genome Resources)	Chr20 q11.22	Chr20:35626031-35664956 (-) GRCh38		Q99829 (UniProt | EBI) NM_001198863 (RefSeq)
mouse	Cpne1	MGI:2386621 (MGI) 266692 (Entrez Gene) Gene Tree Cpne1 (Alliance of Genome Resources)	Chr2 77.34 cM	Chr2:155913765-155953847 (-) GRCm39		266692 (NCBI Gene Model) Q8C166 (UniProt | EBI) NM_170588 (RefSeq)
rat	Cpne1	RGD:1311148 (Rat Genome Database) 362249 (Entrez Gene) Cpne1 (Alliance of Genome Resources)	Chr3 q42			NP_001243394 (RefSeq) NM_001256465 (RefSeq)
	Rbm12	RGD:1594333 (Rat Genome Database) 652928 (Entrez Gene) Rbm12 (Alliance of Genome Resources)	Chr3 q42			NP_001032746 (RefSeq) NM_001409091 (RefSeq)
zebrafish	cpne1	ZDB-GENE-030131-3562 (Zebrafish Model Organism Database) 324841 (Entrez Gene) cpne1 (Alliance of Genome Resources)	Chr11			NP_955993 (RefSeq) NM_001276281 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.