Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CCDC142	HGNC:25889 (HGNC) 84865 (Entrez Gene) CCDC142 (Alliance of Genome Resources)	Chr2 p13.1	Chr2:74471986-74483408 (-) GRCh38		Q17RM4 (UniProt | EBI) NM_032779 (RefSeq)
mouse	Ccdc142	MGI:3045292 (MGI) 243510 (Entrez Gene) Gene Tree Ccdc142 (Alliance of Genome Resources)	Chr6 35.94 cM	Chr6:83078582-83085375 (+) GRCm39		ENSMUSG00000107499 (Ensembl Gene Model) ENSMUSP00000098812 (Ensembl) ENSMUST00000101254 (Ensembl)
rat	Ccdc142	RGD:1561779 (Rat Genome Database) 297380 (Entrez Gene) Ccdc142 (Alliance of Genome Resources)	Chr4 q34			XP_008761307 (RefSeq)
zebrafish	ccdc142	ZDB-GENE-030131-6705 (Zebrafish Model Organism Database) 569287 (Entrez Gene) ccdc142 (Alliance of Genome Resources)	Chr14			XP_697757 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.