Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	HPF1	HGNC:26051 (HGNC) 54969 (Entrez Gene) 616614 (OMIM) HPF1 (Alliance of Genome Resources)	Chr4 q33	Chr4:169729470-169757944 (-) GRCh38		Q9NWY4 (UniProt | EBI) NM_017867 (RefSeq)
mouse	Hpf1	MGI:1919862 (MGI) 72612 (Entrez Gene) Gene Tree Hpf1 (Alliance of Genome Resources)	Chr8 30.9 cM	Chr8:61342533-61360615 (+) GRCm39		72612 (NCBI Gene Model) Q8CFE2 (UniProt | EBI) NR_166424 (RefSeq)
rat	Hpf1	RGD:1311747 (Rat Genome Database) 290706 (Entrez Gene) Hpf1 (Alliance of Genome Resources)	Chr16 p12			NP_001162576 (RefSeq) NM_001169105 (RefSeq)
zebrafish	hpf1	ZDB-GENE-030131-740 (Zebrafish Model Organism Database) 100002184 (Entrez Gene) hpf1 (Alliance of Genome Resources)	Chr1			Q7SXS8 (UniProt | EBI) NM_001005769 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.