Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	VAX1	HGNC:12660 (HGNC) 11023 (Entrez Gene) 604294 (OMIM) VAX1 (Alliance of Genome Resources)	Chr10 q25.3	Chr10:117128520-117138301 (-) GRCh38	syndromic microphthalmia 11	Q5SQQ9 (UniProt | EBI) NM_199131 (RefSeq)
mouse	Vax1	MGI:1277163 (MGI) 22326 (Entrez Gene) Gene Tree Vax1 (Alliance of Genome Resources)	Chr19 54.61 cM	Chr19:59154619-59158488 (-) GRCm39		ENSMUSG00000006270 (Ensembl Gene Model) ENSMUSP00000134642 (Ensembl) ENSMUST00000172821 (Ensembl)
rat	Vax1	RGD:621132 (Rat Genome Database) 64571 (Entrez Gene) Vax1 (Alliance of Genome Resources)	Chr1 q55			Q9JM00 (UniProt | EBI) NM_022636 (RefSeq)
zebrafish	vax1	ZDB-GENE-030904-9 (Zebrafish Model Organism Database) 373870 (Entrez Gene) vax1 (Alliance of Genome Resources)	Chr17			Q801E0 (UniProt | EBI) NM_194410 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.