Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SCAMP1	HGNC:10563 (HGNC) 9522 (Entrez Gene) 606911 (OMIM) SCAMP1 (Alliance of Genome Resources)	Chr5 q14.1	Chr5:78360611-78480739 (+) GRCh38		O15126 (UniProt | EBI) NM_052822 (RefSeq)
mouse	Scamp1	MGI:1349480 (MGI) 107767 (Entrez Gene) Gene Tree Scamp1 (Alliance of Genome Resources)	Chr13 49.22 cM	Chr13:94337818-94422339 (-) GRCm39		107767 (NCBI Gene Model) Q8K021 (UniProt | EBI) NM_001346609 (RefSeq)
rat	Scamp1	RGD:3625 (Rat Genome Database) 29521 (Entrez Gene) Scamp1 (Alliance of Genome Resources)	Chr2 q12			P56603 (UniProt | EBI) NM_001100636 (RefSeq)
zebrafish	scamp1	ZDB-GENE-040426-1803 (Zebrafish Model Organism Database) 402992 (Entrez Gene) scamp1 (Alliance of Genome Resources)	Chr21			NP_991255 (RefSeq) NM_205692 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.