Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	TIMD4	HGNC:25132 (HGNC) 91937 (Entrez Gene) 610096 (OMIM) TIMD4 (Alliance of Genome Resources)	Chr5 q33.3	Chr5:156919292-156963226 (-) GRCh38		Q96H15 (UniProt | EBI) NM_138379 (RefSeq)
mouse	Timd4	MGI:2445125 (MGI) 276891 (Entrez Gene) Gene Tree Timd4 (Alliance of Genome Resources)	Chr11 28.09 cM	Chr11:46701627-46735159 (+) GRCm39	systemic lupus erythematosus	ENSMUSG00000055546 (Ensembl Gene Model) ENSMUSP00000069456 (Ensembl) ENSMUST00000068877 (Ensembl)
rat	Timd4	RGD:1564516 (Rat Genome Database) 497891 (Entrez Gene) Timd4 (Alliance of Genome Resources)	Chr10 q21			NP_001417175 (RefSeq) NM_001430247 (RefSeq)
zebrafish	havcr1	ZDB-GENE-040718-131 (Zebrafish Model Organism Database) 436707 (Entrez Gene) havcr1 (Alliance of Genome Resources)	Chr21			NP_001002434 (RefSeq) NM_001002434 (RefSeq)
	timd4	ZDB-GENE-080303-10 (Zebrafish Model Organism Database) 100142639 (Entrez Gene) timd4 (Alliance of Genome Resources)	Chr21			NP_001116089 (RefSeq) NM_001122617 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.