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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC38A5 HGNC:18070 (HGNC)
92745 (Entrez Gene)
300649 (OMIM)
SLC38A5 (Alliance of Genome Resources)
ChrX p11.23 ChrX:48458537-48470260 (-)
GRCh38
Q8WUX1 (UniProt | EBI)
NM_033518 (RefSeq)
mouse Slc38a5 MGI:2148066 (MGI)
209837 (Entrez Gene)
Gene Tree
Slc38a5 (Alliance of Genome Resources)
ChrX 3.74 cM ChrX:8137620-8146418 (+)
GRCm39
209837 (NCBI Gene Model)
Q3U1J0 (UniProt | EBI)
NM_172479 (RefSeq)
rat Slc38a5 RGD:620702 (Rat Genome Database)
192208 (Entrez Gene)
Slc38a5 (Alliance of Genome Resources)
ChrX q12 A2VCW5 (UniProt | EBI)
NM_138854 (RefSeq)
zebrafish slc38a5a ZDB-GENE-081105-92 (Zebrafish Model Organism Database)
100005797 (Entrez Gene)
slc38a5a (Alliance of Genome Resources)
Chr8 XP_001344749 (RefSeq)
slc38a5b ZDB-GENE-040718-395 (Zebrafish Model Organism Database)
436921 (Entrez Gene)
slc38a5b (Alliance of Genome Resources)
Chr8 NP_001002648 (RefSeq)
NM_001002648 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
10/22/2024
MGI 6.24
The Jackson Laboratory