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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ATG4B HGNC:20790 (HGNC)
23192 (Entrez Gene)
611338 (OMIM)
ATG4B (Alliance of Genome Resources)
Chr2 q37.3 Chr2:241637213-241673857 (+)
GRCh38
Q9Y4P1 (UniProt | EBI)
NM_178326 (RefSeq)
mouse Atg4b MGI:1913865 (MGI)
66615 (Entrez Gene)
Gene Tree
Atg4b (Alliance of Genome Resources)
Chr1 47.32 cM Chr1:93682627-93717328 (+)
GRCm39
66615 (NCBI Gene Model)
Q8BGE6 (UniProt | EBI)
NM_174874 (RefSeq)
rat Atg4b RGD:1309664 (Rat Genome Database)
316640 (Entrez Gene)
Atg4b (Alliance of Genome Resources)
Chr9 q36 A0A0G2QC33 (UniProt | EBI)
NM_001025711 (RefSeq)
zebrafish atg4b ZDB-GENE-040917-3 (Zebrafish Model Organism Database)
448859 (Entrez Gene)
atg4b (Alliance of Genome Resources)
Chr6 Q6DG88 (UniProt | EBI)
NM_001089352 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
10/22/2024
MGI 6.24
The Jackson Laboratory