Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CAVIN4	HGNC:33742 (HGNC) 347273 (Entrez Gene) 617714 (OMIM) CAVIN4 (Alliance of Genome Resources)	Chr9 q31.1	Chr9:100576867-100588389 (+) GRCh38		Q5BKX8 (UniProt | EBI) NM_001018116 (RefSeq)
mouse	Cavin4	MGI:1915266 (MGI) 68016 (Entrez Gene) Gene Tree Cavin4 (Alliance of Genome Resources)	Chr4 26.23 cM	Chr4:48663514-48673492 (+) GRCm39		68016 (NCBI Gene Model) A2AMM0 (UniProt | EBI) NM_026509 (RefSeq)
rat	Cavin4	RGD:1310395 (Rat Genome Database) 313225 (Entrez Gene) Cavin4 (Alliance of Genome Resources)	Chr5 q22			B1PRL5 (UniProt | EBI) NM_001107931 (RefSeq)
zebrafish	cavin4a	ZDB-GENE-050506-21 (Zebrafish Model Organism Database) 552940 (Entrez Gene) cavin4a (Alliance of Genome Resources)	Chr2			A1L260 (UniProt | EBI) NM_001080198 (RefSeq)
	cavin4b	ZDB-GENE-041212-87 (Zebrafish Model Organism Database) 494036 (Entrez Gene) cavin4b (Alliance of Genome Resources)	Chr24			NP_001008579 (RefSeq) NM_001008579 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.