Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	ITLN1	HGNC:18259 (HGNC) 55600 (Entrez Gene) 609873 (OMIM) ITLN1 (Alliance of Genome Resources)	Chr1 q23.3	Chr1:160876540-160885180 (-) GRCh38		Q8WWA0 (UniProt | EBI) NM_017625 (RefSeq)
	ITLN2	HGNC:20599 (HGNC) 142683 (Entrez Gene) 609874 (OMIM) ITLN2 (Alliance of Genome Resources)	Chr1 q23.3	Chr1:160945025-160954809 (-) GRCh38		Q8WWU7 (UniProt | EBI) NM_080878 (RefSeq)
mouse	Itln1	MGI:1333831 (MGI) 16429 (Entrez Gene) Gene Tree Itln1 (Alliance of Genome Resources)	Chr1 79.49 cM	Chr1:171345690-171362862 (-) GRCm39		ENSMUSG00000038209 (Ensembl Gene Model) ENSMUSP00000043837 (Ensembl) ENSMUST00000043094 (Ensembl)
rat	Itln1	RGD:1561048 (Rat Genome Database) 498284 (Entrez Gene) Itln1 (Alliance of Genome Resources)	Chr13 q24			NP_001030118 (RefSeq) NM_001034946 (RefSeq)
zebrafish	itln1	ZDB-GENE-060929-564 (Zebrafish Model Organism Database) 767684 (Entrez Gene) itln1 (Alliance of Genome Resources)	Chr1			NP_001418021 (RefSeq) NM_001431092 (RefSeq)
	itln2	ZDB-GENE-050411-58 (Zebrafish Model Organism Database) 100007792 (Entrez Gene) itln2 (Alliance of Genome Resources)	Chr7			NP_001153013 (RefSeq) NM_001159541 (RefSeq)
	itln3	ZDB-GENE-090527-4 (Zebrafish Model Organism Database) 555334 (Entrez Gene) itln3 (Alliance of Genome Resources)	Chr14			NP_001153056 (RefSeq) NM_001159584 (RefSeq)
	itln4	ZDB-GENE-090527-5 (Zebrafish Model Organism Database) 555755 (Entrez Gene) itln4 (Alliance of Genome Resources)	Chr7			XP_017212706 (RefSeq)
	si:ch211-194p6.10	ZDB-GENE-160728-3 (Zebrafish Model Organism Database) 565124 (Entrez Gene) si:ch211-194p6.10 (Alliance of Genome Resources)	Chr7			XP_021327623 (RefSeq)
	si:ch211-194p6.12	ZDB-GENE-160728-9 (Zebrafish Model Organism Database) 564958 (Entrez Gene) si:ch211-194p6.12 (Alliance of Genome Resources)	Chr7			XP_021327624 (RefSeq)
	zgc:153219	ZDB-GENE-060929-144 (Zebrafish Model Organism Database) 767641 (Entrez Gene) zgc:153219 (Alliance of Genome Resources)	Chr7			NP_001070049 (RefSeq) NM_001076581 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.