Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PM20D1	HGNC:26518 (HGNC) 148811 (Entrez Gene) 617124 (OMIM) PM20D1 (Alliance of Genome Resources)	Chr1 q32.1	Chr1:205828025-205850132 (-) GRCh38		Q6GTS8 (UniProt | EBI) NM_152491 (RefSeq)
mouse	Pm20d1	MGI:2442939 (MGI) 212933 (Entrez Gene) Gene Tree Pm20d1 (Alliance of Genome Resources)	Chr1 57.19 cM	Chr1:131725122-131749210 (+) GRCm39		212933 (NCBI Gene Model) Q8C165 (UniProt | EBI) NM_178079 (RefSeq)
rat	Pm20d1	RGD:1564063 (Rat Genome Database) 498226 (Entrez Gene) Pm20d1 (Alliance of Genome Resources)	Chr13 q13			NP_001102538 (RefSeq) NM_001109068 (RefSeq)
zebrafish	pm20d1.1	ZDB-GENE-051120-102 (Zebrafish Model Organism Database) 553216 (Entrez Gene) pm20d1.1 (Alliance of Genome Resources)	Chr23			Q32LT9 (UniProt | EBI) NM_001037371 (RefSeq)
	pm20d1.2	ZDB-GENE-061013-637 (Zebrafish Model Organism Database) 768158 (Entrez Gene) pm20d1.2 (Alliance of Genome Resources)	Chr23			Q08BB2 (UniProt | EBI) NM_001077301 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.