Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	COPA	HGNC:2230 (HGNC) 1314 (Entrez Gene) 601924 (OMIM) COPA (Alliance of Genome Resources)	Chr1 q23.2	Chr1:160288594-160343566 (-) GRCh38	autoimmune interstitial lung, joint, and kidney disease	P53621 (UniProt | EBI) NM_004371 (RefSeq)
mouse	Copa	MGI:1334462 (MGI) 12847 (Entrez Gene) Gene Tree Copa (Alliance of Genome Resources)	Chr1 79.54 cM	Chr1:171910096-171949897 (+) GRCm39	autoimmune interstitial lung, joint, and kidney disease	ENSMUSG00000026553 (Ensembl Gene Model) ENSMUSP00000027833 (Ensembl) ENSMUST00000027833 (Ensembl)
rat	Copa	RGD:1310525 (Rat Genome Database) 304978 (Entrez Gene) Copa (Alliance of Genome Resources)	Chr13 q24			NP_001128012 (RefSeq) NM_001134540 (RefSeq)
zebrafish	copa	ZDB-GENE-020905-2 (Zebrafish Model Organism Database) 260439 (Entrez Gene) copa (Alliance of Genome Resources)	Chr2			NP_001001941 (RefSeq) NM_001001941 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.