Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SLC2A1	HGNC:11005 (HGNC) 6513 (Entrez Gene) 138140 (OMIM) SLC2A1 (Alliance of Genome Resources)	Chr1 p34.2	Chr1:42925353-42958893 (-) GRCh38	carbohydrate metabolic disorder childhood absence epilepsy dystonia 9 glucose transporter type 1 deficiency syndrome 2 idiopathic generalized epilepsy 12 myelomeningocele obesity type 2 diabetes mellitus	P11166 (UniProt | EBI) NM_006516 (RefSeq)
mouse	Slc2a1	MGI:95755 (MGI) 20525 (Entrez Gene) Gene Tree Slc2a1 (Alliance of Genome Resources)	Chr4 Syntenic	Chr4:118966001-118994527 (+) GRCm39	glucose transporter type 1 deficiency syndrome 1	20525 (NCBI Gene Model) P17809 (UniProt | EBI) NM_001424864 (RefSeq)
rat	Slc2a1	RGD:3704 (Rat Genome Database) 24778 (Entrez Gene) Slc2a1 (Alliance of Genome Resources)	Chr5 q36			P11167 (UniProt | EBI) NM_138827 (RefSeq)
zebrafish	slc2a1a	ZDB-GENE-030131-3158 (Zebrafish Model Organism Database) 555778 (Entrez Gene) slc2a1a (Alliance of Genome Resources)	Chr23			NP_001034897 (RefSeq) NM_001039808 (RefSeq)
	slc2a1b	ZDB-GENE-090915-1 (Zebrafish Model Organism Database) 100321338 (Entrez Gene) slc2a1b (Alliance of Genome Resources)	Chr6			XP_002662574 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.