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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PTPRB HGNC:9665 (HGNC)
5787 (Entrez Gene)
176882 (OMIM)
PTPRB (Alliance of Genome Resources)
Chr12 q15 Chr12:70515870-70637440 (-)
GRCh38
angiosarcoma
brain glioma
breast angiosarcoma
colorectal carcinoma
glioblastoma
lung non-small cell carcinoma
sarcoma
P23467 (UniProt | EBI)
NM_001109754 (RefSeq)
mouse Ptprb MGI:97809 (MGI)
19263 (Entrez Gene)
Gene Tree
Ptprb (Alliance of Genome Resources)
Chr10 64.68 cM Chr10:116111428-116225440 (+)
GRCm39
ENSMUSG00000020154 (Ensembl Gene Model)
ENSMUSP00000151821 (Ensembl)
ENSMUST00000218553 (Ensembl)
rat Ptprb RGD:1305922 (Rat Genome Database)
314843 (Entrez Gene)
Ptprb (Alliance of Genome Resources)
Chr7 q22 NP_001359063 (RefSeq)
NM_001429500 (RefSeq)
zebrafish ptprb ZDB-GENE-101108-3 (Zebrafish Model Organism Database)
100149130 (Entrez Gene)
ptprb (Alliance of Genome Resources)
Chr4 NP_001303656 (RefSeq)
NM_001316727 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
10/22/2024
MGI 6.24
The Jackson Laboratory