Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PCDH12	HGNC:8657 (HGNC) 51294 (Entrez Gene) 605622 (OMIM) PCDH12 (Alliance of Genome Resources)	Chr5 q31.3	Chr5:141943581-141969741 (-) GRCh38		Q9NPG4 (UniProt | EBI) NM_016580 (RefSeq)
mouse	Pcdh12	MGI:1855700 (MGI) 53601 (Entrez Gene) Gene Tree Pcdh12 (Alliance of Genome Resources)	Chr18 20.17 cM	Chr18:38400145-38417454 (-) GRCm39		53601 (NCBI Gene Model) O55134 (UniProt | EBI) NM_017378 (RefSeq)
rat	Pcdh12	RGD:619917 (Rat Genome Database) 116808 (Entrez Gene) Pcdh12 (Alliance of Genome Resources)	Chr18 p11			NP_446396 (RefSeq) NM_053944 (RefSeq)
zebrafish	pcdh12	ZDB-GENE-140106-126 (Zebrafish Model Organism Database) 555419 (Entrez Gene) pcdh12 (Alliance of Genome Resources)	Chr14			XP_683010 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.