Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CCDC54	HGNC:30703 (HGNC) 84692 (Entrez Gene) CCDC54 (Alliance of Genome Resources)	Chr3 q13.12	Chr3:107377439-107378635 (+) GRCh38		Q8NEL0 (UniProt | EBI) NM_032600 (RefSeq)
mouse	Ccdc54	MGI:1916589 (MGI) 69339 (Entrez Gene) Gene Tree Ccdc54 (Alliance of Genome Resources)	Chr16 31.5 cM	Chr16:50410222-50411517 (-) GRCm39		69339 (NCBI Gene Model) Q9DAL3 (UniProt | EBI) NM_027046 (RefSeq)
rat	Ccdc54	RGD:1559779 (Rat Genome Database) 498073 (Entrez Gene) Ccdc54 (Alliance of Genome Resources)	Chr11 q21			NP_001385789 (RefSeq) NM_001398860 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.