Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SCGB3A2	HGNC:18391 (HGNC) 117156 (Entrez Gene) 606531 (OMIM) SCGB3A2 (Alliance of Genome Resources)	Chr5 q32	Chr5:147870682-147882191 (+) GRCh38	allergic rhinitis asthma	Q96PL1 (UniProt | EBI) NM_054023 (RefSeq)
mouse	Scgb3a2	MGI:2153470 (MGI) 117158 (Entrez Gene) Gene Tree Scgb3a2 (Alliance of Genome Resources)	Chr18 23.49 cM	Chr18:43897354-43900464 (+) GRCm39		ENSMUSG00000038791 (Ensembl Gene Model) ENSMUSP00000038872 (Ensembl) ENSMUST00000043803 (Ensembl)
rat	Scgb3a2	RGD:1564790 (Rat Genome Database) 498854 (Entrez Gene) Scgb3a2 (Alliance of Genome Resources)	Chr18 q11			NP_001019454 (RefSeq) NM_001024283 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.