Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
mouse	Or5aq1b	MGI:3030941 (MGI) 258841 (Entrez Gene) Gene Tree Or5aq1b (Alliance of Genome Resources)	Chr2 49.86 cM	Chr2:86901459-86902567 (-) GRCm39		258841 (NCBI Gene Model) NP_667055 (RefSeq) NM_146844 (RefSeq)
rat	Or5aq1	RGD:1333789 (Rat Genome Database) 295792 (Entrez Gene) Or5aq1 (Alliance of Genome Resources)	Chr3 q24			NP_001000321 (RefSeq) NM_001000321 (RefSeq)
	Or5aq1b	RGD:1332922 (Rat Genome Database) 295795 (Entrez Gene) Or5aq1b (Alliance of Genome Resources)	Chr3 q24			NP_001000322 (RefSeq) NM_001000322 (RefSeq)
	Or5aq1d	RGD:1333346 (Rat Genome Database) 405942 (Entrez Gene) Or5aq1d (Alliance of Genome Resources)	Chr3 q24			NP_001001054 (RefSeq) NM_001001054 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.