Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CDH3	HGNC:1762 (HGNC) 1001 (Entrez Gene) 114021 (OMIM) CDH3 (Alliance of Genome Resources)	Chr16 q22.1	Chr16:68636189-68733771 (+) GRCh38	congenital hypotrichosis with juvenile macular dystrophy ectodermal dysplasia, ectrodactyly, and macular dystrophy syndrome	P22223 (UniProt | EBI) NM_001317195 (RefSeq)
mouse	Cdh3	MGI:88356 (MGI) 12560 (Entrez Gene) Gene Tree Cdh3 (Alliance of Genome Resources)	Chr8 53.16 cM	Chr8:107237484-107283543 (+) GRCm39		12560 (NCBI Gene Model) P10287 (UniProt | EBI) NM_001037809 (RefSeq)
rat	Cdh3	RGD:621089 (Rat Genome Database) 116777 (Entrez Gene) Cdh3 (Alliance of Genome Resources)	Chr19 q12			NP_446390 (RefSeq) NM_053938 (RefSeq)
zebrafish	cdh1	ZDB-GENE-010606-1 (Zebrafish Model Organism Database) 114424 (Entrez Gene) cdh1 (Alliance of Genome Resources)	Chr7			NP_571895 (RefSeq) NM_131820 (RefSeq)
	cdh28	ZDB-GENE-081104-9 (Zebrafish Model Organism Database) 108179109 (Entrez Gene) cdh28 (Alliance of Genome Resources)	Chr7			XP_017212586 (RefSeq)
	cdh31	ZDB-GENE-110407-4 (Zebrafish Model Organism Database) 567602 (Entrez Gene) cdh31 (Alliance of Genome Resources)	Chr7			XP_017212590 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.