Ctsm Vertebrate HGNC

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Vertebrate Homology

Source

Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, rat, zebrafish)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
- human
- mouse
- rat
- zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 11/05/2024 MGI 6.24

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences select all deselect all Go
mouse	Ctsm	MGI:1927229 (MGI) 64139 (Entrez Gene) Gene Tree Ctsm (Alliance of Genome Resources)	Chr13 32.74 cM	Chr13:61683557-61689653 (-) GRCm39		ENSMUSG00000074871 (Ensembl Gene Model) ENSMUSP00000097050 (Ensembl) ENSMUST00000099451 (Ensembl)
rat	Ctsm	RGD:631420 (Rat Genome Database) 306720 (Entrez Gene) Ctsm (Alliance of Genome Resources)	Chr17 p14			NP_852043 (RefSeq) NM_181378 (RefSeq)
rat	Ctsml1	RGD:1564827 (Rat Genome Database) 498689 (Entrez Gene) Ctsml1 (Alliance of Genome Resources)	Chr17 p14			NP_001389461 (RefSeq) NM_001402532 (RefSeq)
zebrafish	ctsla	ZDB-GENE-030131-106 (Zebrafish Model Organism Database) 321453 (Entrez Gene) ctsla (Alliance of Genome Resources)	Chr5			NP_997749 (RefSeq) NM_212584 (RefSeq)
	ctslb	ZDB-GENE-980526-285 (Zebrafish Model Organism Database) 30443 (Entrez Gene) ctslb (Alliance of Genome Resources)	Chr12			NP_571273 (RefSeq) NM_131198 (RefSeq)
	ctsll	ZDB-GENE-041010-76 (Zebrafish Model Organism Database) 449826 (Entrez Gene) ctsll (Alliance of Genome Resources)	Chr5			NP_001005999 (RefSeq) NM_001005999 (RefSeq)
	si:dkey-239j18.2	ZDB-GENE-121214-52 (Zebrafish Model Organism Database) 321853 (Entrez Gene) si:dkey-239j18.2 (Alliance of Genome Resources)	Chr12			NP_001274132 (RefSeq) NM_001287203 (RefSeq)
	si:dkey-239j18.3	ZDB-GENE-121214-39 (Zebrafish Model Organism Database) 100001785 (Entrez Gene) si:dkey-239j18.3 (Alliance of Genome Resources)	Chr12			XP_001341714 (RefSeq)
	si:dkey-269i1.4	ZDB-GENE-121214-37 (Zebrafish Model Organism Database) 564835 (Entrez Gene) si:dkey-269i1.4 (Alliance of Genome Resources)	Chr12			NP_001099150 (RefSeq) NM_001105680 (RefSeq)
	zgc:174153	ZDB-GENE-080215-7 (Zebrafish Model Organism Database) 567623 (Entrez Gene) zgc:174153 (Alliance of Genome Resources)	Chr12			NP_001104662 (RefSeq) NM_001111192 (RefSeq)
	zgc:174154	ZDB-GENE-071004-116 (Zebrafish Model Organism Database) 100537591 (Entrez Gene) zgc:174154 (Alliance of Genome Resources)	Chr12			NP_001314908 (RefSeq) NM_001327979 (RefSeq)