Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CHIA	HGNC:17432 (HGNC) 27159 (Entrez Gene) 606080 (OMIM) CHIA (Alliance of Genome Resources)	Chr1 p13.2	Chr1:111290851-111320566 (+) GRCh38	asthma	Q9BZP6 (UniProt | EBI) NM_021797 (RefSeq)
mouse	Chia1	MGI:1932052 (MGI) 81600 (Entrez Gene) Gene Tree Chia1 (Alliance of Genome Resources)	Chr3 46.49 cM	Chr3:106020698-106039434 (+) GRCm39		81600 (NCBI Gene Model) Q91XA9 (UniProt | EBI) NM_023186 (RefSeq)
rat	Chia	RGD:1303058 (Rat Genome Database) 113901 (Entrez Gene) Chia (Alliance of Genome Resources)	Chr2 q34			Q6RY07 (UniProt | EBI) NM_207586 (RefSeq)
zebrafish	chia.2	ZDB-GENE-040426-2014 (Zebrafish Model Organism Database) 406338 (Entrez Gene) chia.2 (Alliance of Genome Resources)	Chr11			NP_998414 (RefSeq) NM_213249 (RefSeq)
	chia.3	ZDB-GENE-040426-2891 (Zebrafish Model Organism Database) 406819 (Entrez Gene) chia.3 (Alliance of Genome Resources)	Chr11			NP_998378 (RefSeq) NM_213213 (RefSeq)
	chia.4	ZDB-GENE-030131-9279 (Zebrafish Model Organism Database) 337333 (Entrez Gene) chia.4 (Alliance of Genome Resources)	Chr23			NP_956740 (RefSeq) NM_200446 (RefSeq)
	chia.6	ZDB-GENE-030131-1140 (Zebrafish Model Organism Database) 322420 (Entrez Gene) chia.6 (Alliance of Genome Resources)	Chr23			NP_955897 (RefSeq) NM_199603 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.