Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	LAMA3	HGNC:6483 (HGNC) 3909 (Entrez Gene) 600805 (OMIM) LAMA3 (Alliance of Genome Resources)	Chr18 q11.2	Chr18:23689453-23956222 (+) GRCh38	junctional epidermolysis bullosa lung small cell carcinoma	Q16787 (UniProt | EBI) NM_001302996 (RefSeq)
mouse	Lama3	MGI:99909 (MGI) 16774 (Entrez Gene) Gene Tree Lama3 (Alliance of Genome Resources)	Chr18 6.2 cM	Chr18:12466876-12716070 (+) GRCm39	junctional epidermolysis bullosa junctional epidermolysis bullosa non-Herlitz type	ENSMUSG00000024421 (Ensembl Gene Model) ENSMUSP00000089703 (Ensembl) ENSMUST00000092070 (Ensembl)
rat	Lama3	RGD:628776 (Rat Genome Database) 307582 (Entrez Gene) Lama3 (Alliance of Genome Resources)	Chr18 p13			NP_001380677 (RefSeq) NM_001393748 (RefSeq)
zebrafish	lama3	ZDB-GENE-050208-475 (Zebrafish Model Organism Database) 101882184 (Entrez Gene) lama3 (Alliance of Genome Resources)	Chr22			XP_021329129 (RefSeq)
	si:ch211-241e1.3	ZDB-GENE-030131-230 (Zebrafish Model Organism Database) 567640 (Entrez Gene) si:ch211-241e1.3 (Alliance of Genome Resources)	Chr2			XP_696031 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.