Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	DDX39A	HGNC:17821 (HGNC) 10212 (Entrez Gene) 619906 (OMIM) DDX39A (Alliance of Genome Resources)	Chr19 p13.12	Chr19:14408798-14419383 (-) GRCh38		O00148 (UniProt | EBI) NM_005804 (RefSeq)
mouse	Ddx39a	MGI:1915528 (MGI) 68278 (Entrez Gene) Gene Tree Ddx39a (Alliance of Genome Resources)	Chr8 40.22 cM	Chr8:84441806-84453521 (+) GRCm39		ENSMUSG00000005481 (Ensembl Gene Model) ENSMUSP00000148329 (Ensembl) ENSMUST00000212949 (Ensembl)
rat	Ddx39a	RGD:619920 (Rat Genome Database) 89827 (Entrez Gene) Ddx39a (Alliance of Genome Resources)	Chr19 q11			Q5U216 (UniProt | EBI) NM_053563 (RefSeq)
zebrafish	ddx39aa	ZDB-GENE-030131-4275 (Zebrafish Model Organism Database) 325550 (Entrez Gene) ddx39aa (Alliance of Genome Resources)	Chr1			NP_001315271 (RefSeq) NM_001328342 (RefSeq)
	ddx39ab	ZDB-GENE-040426-2902 (Zebrafish Model Organism Database) 406249 (Entrez Gene) ddx39ab (Alliance of Genome Resources)	Chr3			NP_998142 (RefSeq) NM_212977 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.