Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
mouse	Nxpe5	MGI:3584036 (MGI) 381680 (Entrez Gene) Gene Tree Nxpe5 (Alliance of Genome Resources)	Chr5 76.99 cM	Chr5:138224160-138251625 (+) GRCm39		ENSMUSG00000047592 (Ensembl Gene Model) ENSMUSP00000124929 (Ensembl) ENSMUST00000161047 (Ensembl)
rat	Nxpe5	RGD:1588255 (Rat Genome Database) 680711 (Entrez Gene) Nxpe5 (Alliance of Genome Resources)	Chr12 q11			XP_038945903 (RefSeq)
	Nxpe5l1	RGD:1559954 (Rat Genome Database) 304353 (Entrez Gene) Nxpe5l1 (Alliance of Genome Resources)	Chr12 q11			XP_038945907 (RefSeq)
	Nxpe5l3	RGD:1562319 (Rat Genome Database) 498165 (Entrez Gene) Nxpe5l3 (Alliance of Genome Resources)	Chr12 q11			XP_038946030 (RefSeq)
zebrafish	nxpe3l	ZDB-GENE-091117-36 (Zebrafish Model Organism Database) 100006634 (Entrez Gene) nxpe3l (Alliance of Genome Resources)	Chr24			NP_001373501 (RefSeq) NM_001386572 (RefSeq)
	si:ch211-157j23.2	ZDB-GENE-030131-5686 (Zebrafish Model Organism Database) 327475 (Entrez Gene) si:ch211-157j23.2 (Alliance of Genome Resources)	Chr24			XP_021325936 (RefSeq)
	si:dkey-285b23.3	ZDB-GENE-131127-31 (Zebrafish Model Organism Database) 100007318 (Entrez Gene) si:dkey-285b23.3 (Alliance of Genome Resources)	Chr15

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.