Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	ITM2C	HGNC:6175 (HGNC) 81618 (Entrez Gene) 609554 (OMIM) ITM2C (Alliance of Genome Resources)	Chr2 q37.1	Chr2:230864185-230879254 (+) GRCh38		Q9NQX7 (UniProt | EBI) NM_001012514 (RefSeq)
mouse	Itm2c	MGI:1927594 (MGI) 64294 (Entrez Gene) Gene Tree Itm2c (Alliance of Genome Resources)	Chr1 43.94 cM	Chr1:85822231-85836419 (+) GRCm39		64294 (NCBI Gene Model) Q91VK4 (UniProt | EBI) NM_022417 (RefSeq)
rat	Itm2c	RGD:1309503 (Rat Genome Database) 301575 (Entrez Gene) Itm2c (Alliance of Genome Resources)	Chr9 q35			Q5PQL7 (UniProt | EBI) NM_001009674 (RefSeq)
zebrafish	itm2ca	ZDB-GENE-040718-284 (Zebrafish Model Organism Database) 436822 (Entrez Gene) itm2ca (Alliance of Genome Resources)	Chr15			NP_001002549 (RefSeq) NM_001002549 (RefSeq)
	itm2cb	ZDB-GENE-030131-7806 (Zebrafish Model Organism Database) 335863 (Entrez Gene) itm2cb (Alliance of Genome Resources)	Chr2			NP_956274 (RefSeq) NM_199980 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.