Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	STX6	HGNC:11441 (HGNC) 10228 (Entrez Gene) 603944 (OMIM) STX6 (Alliance of Genome Resources)	Chr1 q25.3	Chr1:180972712-181023121 (-) GRCh38		O43752 (UniProt | EBI) NM_001286210 (RefSeq)
mouse	Stx6	MGI:1926235 (MGI) 58244 (Entrez Gene) Gene Tree Stx6 (Alliance of Genome Resources)	Chr1 66.46 cM	Chr1:155034374-155083405 (+) GRCm39		58244 (NCBI Gene Model) Q9JKK1 (UniProt | EBI) NM_021433 (RefSeq)
rat	Stx6	RGD:61915 (Rat Genome Database) 60562 (Entrez Gene) Stx6 (Alliance of Genome Resources)	Chr13 q21			Q63635 (UniProt | EBI) NM_031665 (RefSeq)
zebrafish	stx6	ZDB-GENE-030131-858 (Zebrafish Model Organism Database) 550577 (Entrez Gene) stx6 (Alliance of Genome Resources)	Chr22			NP_001017879 (RefSeq) NM_001017879 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.