Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CCR6	HGNC:1607 (HGNC) 1235 (Entrez Gene) 601835 (OMIM) CCR6 (Alliance of Genome Resources)	Chr6 q27	Chr6:167111795-167139141 (+) GRCh38		P51684 (UniProt | EBI) NM_031409 (RefSeq)
mouse	Ccr6	MGI:1333797 (MGI) 12458 (Entrez Gene) Gene Tree Ccr6 (Alliance of Genome Resources)	Chr17 4.9 cM	Chr17:8454875-8475973 (+) GRCm39		ENSMUSG00000040899 (Ensembl Gene Model) ENSMUSP00000131153 (Ensembl) ENSMUST00000164411 (Ensembl)
rat	Ccr6	RGD:1308562 (Rat Genome Database) 308163 (Entrez Gene) Ccr6 (Alliance of Genome Resources)	Chr1 q12			NP_001013163 (RefSeq) NM_001013145 (RefSeq)
zebrafish	ccr6a	ZDB-GENE-040625-126 (Zebrafish Model Organism Database) 558616 (Entrez Gene) ccr6a (Alliance of Genome Resources)	Chr20			NP_001093461 (RefSeq) NM_001099991 (RefSeq)
	ccr6b	ZDB-GENE-030131-8888 (Zebrafish Model Organism Database) 336944 (Entrez Gene) ccr6b (Alliance of Genome Resources)	Chr17			XP_002665313 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.