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Vertebrate Homology
Source
 Alliance of Genome Resources

 
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)		 Associated Human Diseases Sequences
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human IGHV1-2 HGNC:5550 (HGNC)
28474 (Entrez Gene)
IGHV1-2 (Alliance of Genome Resources)
 Chr14 q32.33 Chr14:105986582-105987083 (-)
GRCh38
IGHV1-3 HGNC:5552 (HGNC)
28473 (Entrez Gene)
IGHV1-3 (Alliance of Genome Resources)
 Chr14 q32.33 Chr14:106005095-106005574 (-)
GRCh38 		A0A0C4DH29 (UniProt | EBI)
IGHV1-18 HGNC:5549 (HGNC)
28468 (Entrez Gene)
IGHV1-18 (Alliance of Genome Resources)
 Chr14 q32.33 Chr14:106184899-106185394 (-)
GRCh38 		A0A0C4DH31 (UniProt | EBI)
IGHV1-24 HGNC:5551 (HGNC)
28467 (Entrez Gene)
IGHV1-24 (Alliance of Genome Resources)
 Chr14 q32.33 Chr14:106276546-106277043 (-)
GRCh38 		A0A0C4DH33 (UniProt | EBI)
IGHV1-38-4 HGNC:5560 (HGNC)
28460 (Entrez Gene)
IGHV1-38-4 (Alliance of Genome Resources)
 Chr14 q32.33 P0DTW3 (UniProt | EBI)
IGHV1-45 HGNC:5553 (HGNC)
28466 (Entrez Gene)
IGHV1-45 (Alliance of Genome Resources)
 Chr14 q32.33 Chr14:106506996-106507491 (-)
GRCh38 		A0A0A0MS14 (UniProt | EBI)
IGHV1-46 HGNC:5554 (HGNC)
28465 (Entrez Gene)
IGHV1-46 (Alliance of Genome Resources)
 Chr14 q32.33 Chr14:106511115-106511856 (-)
GRCh38
IGHV1-58 HGNC:5555 (HGNC)
28464 (Entrez Gene)
IGHV1-58 (Alliance of Genome Resources)
 Chr14 q32.33 Chr14:106622357-106622855 (-)
GRCh38 		A0A0C4DH39 (UniProt | EBI)
IGHV1-69 HGNC:5558 (HGNC)
28461 (Entrez Gene)
IGHV1-69 (Alliance of Genome Resources)
 Chr14 q32.33 Chr14:106714682-106715181 (-)
GRCh38 		P01742 (UniProt | EBI)
IGHV1-69-2 HGNC:5562 (HGNC)
28458 (Entrez Gene)
IGHV1-69-2 (Alliance of Genome Resources)
 Chr14 q32.33 Chr14:106737110-106737547 (-)
GRCh38 		A0A0G2JMI3 (UniProt | EBI)
IGHV1-69D HGNC:49601 (HGNC)
102723169 (Entrez Gene)
IGHV1-69D (Alliance of Genome Resources)
 Chr14 q32.33 Chr14:106762092-106762588 (-)
GRCh38 		A0A0B4J2H0 (UniProt | EBI)
IGHV1OR15-1 HGNC:5563 (HGNC)
388077 (Entrez Gene)
IGHV1OR15-1 (Alliance of Genome Resources)
 Chr15 q11.2
IGHV1OR15-9 HGNC:5569 (HGNC)
390531 (Entrez Gene)
IGHV1OR15-9 (Alliance of Genome Resources)
 Chr15 q11.1
IGHV1OR21-1 HGNC:38040 (HGNC)
390530 (Entrez Gene)
IGHV1OR21-1 (Alliance of Genome Resources)
 Chr21 p11.2 Chr21:10649390-10649835 (-)
GRCh38
mouse Ighv1-84 MGI:3644235 (MGI)
434609 (Entrez Gene)
Gene Tree
Ighv1-84 (Alliance of Genome Resources)
 Chr12 62.59 cM Chr12:115944322-115944754 (-)
GRCm39 		434609 (NCBI Gene Model)
P06327 (UniProt | EBI)
AF045503 (GenBank | ENA | DDBJ)
zebrafish ighv2-1 ZDB-GENE-040514-2 (Zebrafish Model Organism Database)
100535575 (Entrez Gene)
ighv2-1 (Alliance of Genome Resources)
 Chr3
ighv2-2 ZDB-GENE-030924-5 (Zebrafish Model Organism Database)
378757 (Entrez Gene)
ighv2-2 (Alliance of Genome Resources)
 Chr3
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory