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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TRIM60 HGNC:21162 (HGNC)
166655 (Entrez Gene)
619416 (OMIM)
TRIM60 (Alliance of Genome Resources)
Chr4 q32.3 Chr4:165016458-165041749 (+)
GRCh38
Q495X7 (UniProt | EBI)
NM_001258025 (RefSeq)
mouse Trim60 MGI:2387430 (MGI)
234329 (Entrez Gene)
Gene Tree
Trim60 (Alliance of Genome Resources)
Chr8 32.51 cM Chr8:65451959-65471236 (-)
GRCm39
ENSMUSG00000053490 (Ensembl Gene Model)
ENSMUSP00000040299 (Ensembl)
ENSMUST00000048565 (Ensembl)
zebrafish btr02 ZDB-GENE-060825-228 (Zebrafish Model Organism Database)
562439 (Entrez Gene)
btr02 (Alliance of Genome Resources)
Chr3 NP_001070626 (RefSeq)
NM_001077158 (RefSeq)
si:dkey-183c6.9 ZDB-GENE-160728-24 (Zebrafish Model Organism Database)
101883673 (Entrez Gene)
si:dkey-183c6.9 (Alliance of Genome Resources)
Chr7 XP_005172380 (RefSeq)
trim47 ZDB-GENE-040426-1000 (Zebrafish Model Organism Database)
393254 (Entrez Gene)
trim47 (Alliance of Genome Resources)
Chr10 NP_956578 (RefSeq)
NM_200284 (RefSeq)
trim107 ZDB-GENE-110919-5 (Zebrafish Model Organism Database)
100329882 (Entrez Gene)
trim107 (Alliance of Genome Resources)
Chr6 XP_017212033 (RefSeq)
trim108 ZDB-GENE-060503-670 (Zebrafish Model Organism Database)
568750 (Entrez Gene)
trim108 (Alliance of Genome Resources)
Chr16 NP_001038633 (RefSeq)
NM_001045168 (RefSeq)
trim109 ZDB-GENE-060616-101 (Zebrafish Model Organism Database)
723998 (Entrez Gene)
trim109 (Alliance of Genome Resources)
Chr16 NP_001038768 (RefSeq)
NM_001045303 (RefSeq)
trim110 ZDB-GENE-070912-10 (Zebrafish Model Organism Database)
100536764 (Entrez Gene)
trim110 (Alliance of Genome Resources)
Chr2 XP_021326940 (RefSeq)
zgc:92594 ZDB-GENE-040718-482 (Zebrafish Model Organism Database)
436996 (Entrez Gene)
zgc:92594 (Alliance of Genome Resources)
Chr7 NP_001002723 (RefSeq)
NM_001002723 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
10/29/2024
MGI 6.24
The Jackson Laboratory